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When Do Quantum Kernels Help? An Empirical and Diagnostic Study of the ZZ Feature Map

Luis Mendez — University of Connecticut

Preprint · August 2026 · luis.a.mendez@uconn.edu

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Abstract

Quantum kernel methods promise richer feature spaces than classical kernels by encoding data into the exponentially large Hilbert space of a quantum circuit, but it is unclear how often this promise translates into an actual advantage on realistic data. We build a from-scratch, exactly-simulated implementation of the Havlíček et al. (2019) ZZ feature-map fidelity kernel — without any quantum computing library — validate it against an independent brute-force construction, and use it to run a controlled comparison against classical (RBF, polynomial, linear) kernels under an identical model-selection protocol. On a synthetic dataset engineered so its labels are a function of the same feature map (a positive control), the quantum kernel reaches 98.3% test accuracy versus 48–53% (chance level) for every classical kernel. On the MiniBooNE particle-identification benchmark — a real high-energy-physics classification task (Fermilab electron-neutrino vs. muon-neutrino events) with no engineered relationship to any quantum feature map — the result reverses sharply: classical kernels reach 81–87% accuracy while the quantum kernel collapses to 71.7% at both PCA dimensionalities we test, exactly the majority-class baseline in both cases. We diagnose this gap using kernel-target alignment and kernel-value statistics, and connect it to existing theory on the inductive bias and concentration of quantum kernels. Our results are an honest negative result for quantum kernels as a drop-in replacement for classical kernels on generic data, and a clean positive control demonstrating our simulator and evaluation protocol are correct and can detect an advantage when one is present by construction.